Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc188F6WEU2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc188F6WEU2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Gm27618-201ENSMUST00000183671 60 ntBASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Gm27301-201ENSMUST00000184012 127 ntBASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Gm9794-201ENSMUST00000202370 423 ntBASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc188F6WEU2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc188F6WEU2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc188F6WEU2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc188F6WEU2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms