Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.24■□□□□ 0.67
Pcdhb9E9Q5G2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Gm44454-201ENSMUST00000198541 138 ntBASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb9E9Q5G2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Haglr-201ENSMUST00000100000 2085 ntBASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Gm34391-201ENSMUST00000203706 907 ntBASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Pcdhb9E9Q5G2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb9E9Q5G2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb9E9Q5G2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Birc2-201ENSMUST00000054878 378 ntBASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms