Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.15□□□□□ -0.94
Herc1E9PZP8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.15□□□□□ -0.94
Herc1E9PZP8 Mir7070-201ENSMUST00000183657 86 ntBASIC9.15□□□□□ -0.94
Herc1E9PZP8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.15□□□□□ -0.94
Herc1E9PZP8 Gm29791-202ENSMUST00000207888 369 ntBASIC9.15□□□□□ -0.94
Herc1E9PZP8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
Herc1E9PZP8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC9.15□□□□□ -0.95
Herc1E9PZP8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Herc1E9PZP8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC9.15□□□□□ -0.95
Herc1E9PZP8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Herc1E9PZP8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm27680-201ENSMUST00000184192 160 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm37424-201ENSMUST00000191727 561 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm12742-201ENSMUST00000117326 410 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm7507-201ENSMUST00000183053 1008 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm18766-201ENSMUST00000189811 808 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Grk6-206ENSMUST00000224995 2971 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gm43703-201ENSMUST00000200523 763 ntBASIC9.14□□□□□ -0.95
Herc1E9PZP8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Herc1E9PZP8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm8062-201ENSMUST00000139696 444 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm18057-201ENSMUST00000208220 503 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms