Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh17E9PXF0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh17E9PXF0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh17E9PXF0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh17E9PXF0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh17E9PXF0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Gm15372-201ENSMUST00000120729 834 ntBASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh17E9PXF0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh17E9PXF0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Gm28659-201ENSMUST00000188013 759 ntBASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Mzt1-203ENSMUST00000227948 952 ntBASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh17E9PXF0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms