Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm38294-201ENSMUST00000192831 381 ntBASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm6266-201ENSMUST00000203844 806 ntBASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a3E9PWQ3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a3E9PWQ3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm7774-201ENSMUST00000200064 533 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.3■□□□□ 0.2
Col6a3E9PWQ3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a3E9PWQ3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms