Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim30bE9PVL6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim30bE9PVL6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim30bE9PVL6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim30bE9PVL6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim30bE9PVL6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Gm15173-201ENSMUST00000122049 433 ntBASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Gm7230-201ENSMUST00000173026 815 ntBASIC17.39■□□□□ 0.37
Trim30bE9PVL6 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim30bE9PVL6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Rarb-207ENSMUST00000225921 2756 ntBASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm8097-201ENSMUST00000117903 829 ntBASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm4459-201ENSMUST00000118750 468 ntBASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm12497-201ENSMUST00000138778 237 ntBASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Gm5364-201ENSMUST00000216789 889 ntBASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim30bE9PVL6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim30bE9PVL6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim30bE9PVL6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.36■□□□□ 0.37
Trim30bE9PVL6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim30bE9PVL6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim30bE9PVL6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim30bE9PVL6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms