Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.35■□□□□ 0.37
Rfx8D3YU81 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx8D3YU81 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.34■□□□□ 0.37
Rfx8D3YU81 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfx8D3YU81 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfx8D3YU81 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfx8D3YU81 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx8D3YU81 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rfx8D3YU81 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx8D3YU81 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx8D3YU81 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rfx8D3YU81 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Gm7977-201ENSMUST00000193787 748 ntBASIC17.33■□□□□ 0.36
Rfx8D3YU81 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.33■□□□□ 0.36
Rfx8D3YU81 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx8D3YU81 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.32■□□□□ 0.36
Rfx8D3YU81 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx8D3YU81 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms