Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm12887B1AVM1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm12887B1AVM1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm12887B1AVM1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm12887B1AVM1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Gm4968-201ENSMUST00000071458 858 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms