Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Gm8344-201ENSMUST00000119813 856 ntBASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a6B1AVK5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a6B1AVK5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a6B1AVK5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a6B1AVK5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col4a6B1AVK5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.77■□□□□ 0.27
Col4a6B1AVK5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a6B1AVK5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a6B1AVK5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Gm9682-201ENSMUST00000197505 556 ntBASIC16.75■□□□□ 0.27
Col4a6B1AVK5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Gm8396-201ENSMUST00000057361 823 ntBASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col4a6B1AVK5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Col4a6B1AVK5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a6B1AVK5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms