Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Gm15693-201ENSMUST00000120470 637 ntBASIC25.77■■□□□ 1.72
Shroom2A2ALU4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Shroom2A2ALU4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
Shroom2A2ALU4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Gm37277-201ENSMUST00000194052 1111 ntBASIC25.76■■□□□ 1.71
Shroom2A2ALU4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Shroom2A2ALU4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Gpr146-202ENSMUST00000053120 1040 ntBASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom2A2ALU4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shroom2A2ALU4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC25.73■■□□□ 1.71
Shroom2A2ALU4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Rpph1-201ENSMUST00000175096 319 ntBASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Gm24158-201ENSMUST00000175263 71 ntBASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 AC135669.1-201ENSMUST00000213585 412 ntBASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Thap2-203ENSMUST00000218989 527 ntBASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom2A2ALU4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Gm13294-201ENSMUST00000121757 1330 ntBASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Gm9682-201ENSMUST00000197505 556 ntBASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom2A2ALU4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Shroom2A2ALU4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Shroom2A2ALU4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Gm45203-201ENSMUST00000206384 1831 ntBASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 190.3 ms