Protein–RNA interactions for Protein: A1A535

Veph1, Ventricular zone-expressed PH domain-containing protein 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Veph1A1A535 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.35■□□□□ 0.37
Veph1A1A535 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.35■□□□□ 0.37
Veph1A1A535 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.35■□□□□ 0.37
Veph1A1A535 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.35■□□□□ 0.37
Veph1A1A535 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.35■□□□□ 0.37
Veph1A1A535 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Veph1A1A535 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Veph1A1A535 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Veph1A1A535 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Gm6443-201ENSMUST00000203599 874 ntBASIC17.34■□□□□ 0.37
Veph1A1A535 Gm6376-201ENSMUST00000209407 580 ntBASIC17.34■□□□□ 0.37
Veph1A1A535 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Veph1A1A535 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Veph1A1A535 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Veph1A1A535 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Veph1A1A535 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Veph1A1A535 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Veph1A1A535 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Veph1A1A535 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.33■□□□□ 0.37
Veph1A1A535 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Veph1A1A535 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.33■□□□□ 0.36
Veph1A1A535 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.33■□□□□ 0.36
Veph1A1A535 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.33■□□□□ 0.36
Veph1A1A535 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Veph1A1A535 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Veph1A1A535 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Veph1A1A535 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Veph1A1A535 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.33■□□□□ 0.36
Veph1A1A535 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Veph1A1A535 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.32■□□□□ 0.36
Veph1A1A535 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.32■□□□□ 0.36
Veph1A1A535 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Veph1A1A535 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.32■□□□□ 0.36
Veph1A1A535 Gm43514-201ENSMUST00000198852 424 ntBASIC17.32■□□□□ 0.36
Veph1A1A535 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.32■□□□□ 0.36
Veph1A1A535 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Veph1A1A535 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.32■□□□□ 0.36
Veph1A1A535 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.32■□□□□ 0.36
Veph1A1A535 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Veph1A1A535 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.31■□□□□ 0.36
Veph1A1A535 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.31■□□□□ 0.36
Veph1A1A535 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.31■□□□□ 0.36
Veph1A1A535 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Rarb-207ENSMUST00000225921 2756 ntBASIC17.31■□□□□ 0.36
Veph1A1A535 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Veph1A1A535 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms