Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-1A0N8R0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-1A0N8R0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-1A0N8R0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Gm10698-201ENSMUST00000182663 604 ntBASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Gm7791-201ENSMUST00000219066 539 ntBASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms