Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Gm44450-201ENSMUST00000199528 114 ntBASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Gm7370-201ENSMUST00000219471 767 ntBASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc112A0AUP1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc112A0AUP1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Gm22240-201ENSMUST00000175225 82 ntBASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc112A0AUP1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Gm10812-201ENSMUST00000099864 546 ntBASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc112A0AUP1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms