Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lnp1A0A1B0GSK3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm18115-201ENSMUST00000221209 621 ntBASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.64□□□□□ -0.23
Lnp1A0A1B0GSK3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm11336-201ENSMUST00000118168 334 ntBASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Mir7071-201ENSMUST00000184847 69 ntBASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lnp1A0A1B0GSK3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm22697-201ENSMUST00000175194 63 ntBASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Gm18421-201ENSMUST00000204122 625 ntBASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lnp1A0A1B0GSK3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms