Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv17A0A140T8P8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Gm45058-201ENSMUST00000205810 766 ntBASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv17A0A140T8P8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms