Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv29A0A0G2LB96 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv29A0A0G2LB96 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.62□□□□□ -0.23
Trbv29A0A0G2LB96 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv29A0A0G2LB96 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv29A0A0G2LB96 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv29A0A0G2LB96 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Mir1199-201ENSMUST00000117015 119 ntBASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv29A0A0G2LB96 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv29A0A0G2LB96 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Trbv29A0A0G2LB96 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv29A0A0G2LB96 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv29A0A0G2LB96 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv29A0A0G2LB96 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Gm13186-201ENSMUST00000118031 316 ntBASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trbv29A0A0G2LB96 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms