Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav19A0A0B4J1K4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav19A0A0B4J1K4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav19A0A0B4J1K4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav19A0A0B4J1K4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav19A0A0B4J1K4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav19A0A0B4J1K4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Gm43183-201ENSMUST00000200632 547 ntBASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav19A0A0B4J1K4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Gm27275-201ENSMUST00000184318 272 ntBASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav19A0A0B4J1K4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Gm18958-201ENSMUST00000174258 762 ntBASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms