Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm18958-201ENSMUST00000174258 762 ntBASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm7638-201ENSMUST00000121348 967 ntBASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm13168-201ENSMUST00000121771 632 ntBASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm20049-201ENSMUST00000219950 730 ntBASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Il3ra-202ENSMUST00000223589 738 ntBASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sirpb1aA0A0A6YYP6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms