Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav21-dv12A0A075B6C4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav21-dv12A0A075B6C4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms