Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sybu-209ENSMUST00000228639 4113 ntBASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm43183-201ENSMUST00000200632 547 ntBASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms