Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6-5A0A075B6B5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Gm10493-201ENSMUST00000097270 612 ntBASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-5A0A075B6B5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-5A0A075B6B5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-5A0A075B6B5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms