Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Gm23634-201ENSMUST00000175071 91 ntBASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gm6659-201ENSMUST00000174752 547 ntBASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gm5587-201ENSMUST00000206270 674 ntBASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-4A0A075B6B4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-4A0A075B6B4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 AA414768-201ENSMUST00000121924 1257 ntBASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms