Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav12d-3A0A075B6A4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav12d-3A0A075B6A4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-3A0A075B6A4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-3A0A075B6A4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-3A0A075B6A4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Trav12d-3A0A075B6A4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp783-201ENSMUST00000095946 670 ntBASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 BC037039-201ENSMUST00000192003 2205 ntBASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Reep4-203ENSMUST00000226563 1444 ntBASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12d-3A0A075B6A4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-3A0A075B6A4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms