Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Cap2-205ENSMUST00000225824 1634 ntBASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Gm12922-201ENSMUST00000120626 809 ntBASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Gm5812-201ENSMUST00000061073 957 ntBASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-4A0A075B654 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-4A0A075B654 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms