Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm18958-201ENSMUST00000174258 762 ntBASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm7638-201ENSMUST00000121348 967 ntBASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm20049-201ENSMUST00000219950 730 ntBASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms