Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm12896-201ENSMUST00000118430 226 ntBASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-2A0A075B649 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Gm42545-201ENSMUST00000202755 922 ntBASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-2A0A075B649 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Gm4974-201ENSMUST00000209974 875 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-2A0A075B649 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Dio3-201ENSMUST00000097228 1449 ntBASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-2A0A075B649 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms