Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gm4459-201ENSMUST00000118750 468 ntBASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gm6089-201ENSMUST00000197666 938 ntBASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trav8n-2A0A075B633 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Gm7222-201ENSMUST00000117512 906 ntBASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Gm14140-201ENSMUST00000119999 995 ntBASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trav8n-2A0A075B633 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8n-2A0A075B633 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8n-2A0A075B633 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8n-2A0A075B633 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav8n-2A0A075B633 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms