Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Gm4974-201ENSMUST00000209974 875 ntBASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6n-5A0A075B621 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Gm10493-201ENSMUST00000097270 612 ntBASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-5A0A075B621 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-5A0A075B621 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-5A0A075B621 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6n-5A0A075B621 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms