Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7n-4A0A075B620 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Mir6349-201ENSMUST00000184059 97 ntBASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav7n-4A0A075B620 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7n-4A0A075B620 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Gm7514-201ENSMUST00000209475 934 ntBASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms