Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Gm27742-201ENSMUST00000184667 60 ntBASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Gm36967-201ENSMUST00000193814 266 ntBASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-5A0A075B604 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Gm21362-201ENSMUST00000194272 928 ntBASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Gm7367-201ENSMUST00000057611 492 ntBASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav7n-5A0A075B604 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Gm15794-201ENSMUST00000120182 631 ntBASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav7n-5A0A075B604 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7n-5A0A075B604 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav7n-5A0A075B604 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trav7n-5A0A075B604 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.4□□□□□ -0.27
Trav7n-5A0A075B604 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav7n-5A0A075B604 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav7n-5A0A075B604 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7n-5A0A075B604 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav7n-5A0A075B604 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7n-5A0A075B604 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7n-5A0A075B604 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms