Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ELOCP12-201ENST00000458706 328 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 ACTR6P1-201ENST00000514311 1104 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 RNU6-347P-201ENST00000516658 105 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 IGHV3-76-201ENST00000522465 295 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 MTND5P21-201ENST00000531961 522 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.11□□□□□ -2.07
ABCA4P78363 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.11□□□□□ -2.07
ABCA4P78363 MIR5092-201ENST00000583139 88 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 AP004247.3-201ENST00000608682 624 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 AC092184.1-201ENST00000625042 715 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 AC091564.4-201ENST00000533934 2194 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ABCA4P78363 AC080128.1-201ENST00000474389 1917 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AP000526.1-201ENST00000603308 1388 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 CUL1P1-201ENST00000509510 2425 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.1□□□□□ -2.07
ABCA4P78363 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ABCA4P78363 RNU6-697P-201ENST00000363348 107 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ABCA4P78363 RNU2-6P-201ENST00000411404 190 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.1□□□□□ -2.07
ABCA4P78363 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.1□□□□□ -2.07
ABCA4P78363 AL353898.1-201ENST00000444055 238 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC104389.3-201ENST00000445629 235 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 HMGB1P48-201ENST00000446155 598 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 TRBV1-201ENST00000476502 284 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC092451.1-201ENST00000480211 153 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 DYNLL1P6-201ENST00000503440 264 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.1□□□□□ -2.07
ABCA4P78363 AP000857.1-201ENST00000532151 543 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC074029.1-201ENST00000552531 1044 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 NRBF2P1-201ENST00000587407 859 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ABCA4P78363 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
ABCA4P78363 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
ABCA4P78363 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ABCA4P78363 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
ABCA4P78363 AL161781.1-201ENST00000354277 403 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 RNA5SP189-201ENST00000364920 115 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AL359511.1-201ENST00000402970 211 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 HSPE1P26-201ENST00000405341 275 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AP000893.1-201ENST00000474462 794 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ABCA4P78363 AC128657.1-201ENST00000549459 145 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC105137.2-201ENST00000569073 466 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC083760.1-201ENST00000589621 670 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC012213.4-201ENST00000606457 354 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.1□□□□□ -2.07
ABCA4P78363 AC110994.2-201ENST00000635481 492 ntBASIC2.1□□□□□ -2.07
ABCA4P78363 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.09□□□□□ -2.07
ABCA4P78363 AL034374.1-201ENST00000406329 351 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 MIR1287-201ENST00000408492 90 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
ABCA4P78363 AC080125.1-201ENST00000414888 684 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.09□□□□□ -2.07
ABCA4P78363 HMGB1P15-201ENST00000453854 435 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 RPS27AP9-201ENST00000477681 438 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 SNORA31.1-201ENST00000515993 133 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 SNORA31.5-201ENST00000516190 133 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.09□□□□□ -2.07
ABCA4P78363 AC006254.3-201ENST00000603353 884 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 LLPHP1-201ENST00000603571 367 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 AL355816.1-201ENST00000607951 118 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 AC006065.5-201ENST00000623427 349 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 RPL23AP61-201ENST00000623642 466 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
ABCA4P78363 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 AC022031.1-201ENST00000585985 2593 ntBASIC2.09□□□□□ -2.07
ABCA4P78363 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.09□□□□□ -2.08
ABCA4P78363 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
ABCA4P78363 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ABCA4P78363 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ABCA4P78363 RNA5SP210-201ENST00000391034 120 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 Y_RNA.595-201ENST00000410403 105 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 AC107081.1-201ENST00000414975 361 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCA4P78363 AL592045.1-201ENST00000429867 352 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 HIGD1AP2-201ENST00000446367 280 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 SNRPGP3-201ENST00000469405 227 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 RPL23AP70-201ENST00000483361 460 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 AC092185.1-201ENST00000491371 97 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ABCA4P78363 AC091917.2-201ENST00000505002 744 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 NPM1P52-201ENST00000518264 846 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCA4P78363 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.08□□□□□ -2.08
ABCA4P78363 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCA4P78363 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCA4P78363 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 AC097714.1-201ENST00000511272 1647 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ABCA4P78363 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ABCA4P78363 MTCYBP31-201ENST00000438855 1122 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms