Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC093534.1-201ENST00000504977 132 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC020699.1-201ENST00000505161 445 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC016065.2-201ENST00000514530 444 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 FABP5P12-201ENST00000515543 389 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 RNU6-276P-201ENST00000516114 96 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.12□□□□□ -1.91
HOXC4P09017 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC010376.1-201ENST00000522101 334 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC011602.1-201ENST00000546484 331 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC4P09017 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.12□□□□□ -1.91
HOXC4P09017 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC012254.4-201ENST00000588843 273 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC006539.2-201ENST00000601729 572 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AL160237.3-201ENST00000604114 1013 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC091488.1-201ENST00000604239 660 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AL450336.1-201ENST00000605180 586 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC4P09017 RNU4-5P-201ENST00000607255 135 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC245100.7-201ENST00000609678 442 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 RNU6-1192P-201ENST00000612197 107 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 RNU6-489P-201ENST00000618289 107 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.12□□□□□ -1.91
HOXC4P09017 AC092608.3-201ENST00000625017 386 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 PABPC1P7-201ENST00000413177 1513 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC4P09017 MFSD8-213ENST00000641134 1327 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 MAPK10-362ENST00000641864 4484 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 AC107081.3-201ENST00000612715 2034 ntBASIC3.12□□□□□ -1.91
HOXC4P09017 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC4P09017 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC4P09017 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC4P09017 ZNF833P-201ENST00000424938 1494 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC4P09017 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC4P09017 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
HOXC4P09017 RPL23AP57-201ENST00000332361 466 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 MIR422A-201ENST00000362286 90 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RNU6-1339P-201ENST00000363574 91 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RNU6-805P-201ENST00000365643 106 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RPL17P50-201ENST00000396131 546 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AL603865.2-201ENST00000401679 213 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 Z92545.1-201ENST00000411782 234 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC4P09017 DEFB130D-201ENST00000426866 237 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC4P09017 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC4P09017 FABP5P3-201ENST00000437960 408 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 MTND1P33-201ENST00000446251 917 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AL671855.1-201ENST00000446875 1203 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC4P09017 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AL035407.2-201ENST00000454090 378 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC4P09017 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RPL7P5-201ENST00000471472 736 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RPS17P11-201ENST00000474297 293 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RPL31P13-201ENST00000484151 370 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC4P09017 POU5F1P7-201ENST00000508759 541 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC4P09017 RN7SKP289-201ENST00000517244 295 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 EEF1A1P37-201ENST00000522748 715 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC4P09017 AL132857.1-201ENST00000555180 708 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXC4P09017 AC124283.4-201ENST00000581815 456 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RN7SL622P-201ENST00000585292 275 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 AC007566.2-201ENST00000603642 413 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 Z99289.3-201ENST00000605586 594 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 RMST_10.1-201ENST00000616309 154 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 FRG1HP-204ENST00000617940 757 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 U73479.1-201ENST00000618062 168 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HOXC4P09017 PLCE1P1-201ENST00000622094 305 ntBASIC3.11□□□□□ -1.91
HOXC4P09017 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC4P09017 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HOXC4P09017 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC4P09017 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC4P09017 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC4P09017 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC4P09017 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 AL021368.2-201ENST00000606125 5352 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 RNA5SP27-201ENST00000363839 119 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 SNORA7.2-201ENST00000364446 145 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 MIR607-201ENST00000385241 96 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 DSTNP4-201ENST00000399472 474 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms