Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 AL445669.2-201ENST00000454425 421 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 SNORD109B-201ENST00000458961 67 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 SNORD109A-201ENST00000459128 67 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 RPL5P24-201ENST00000463742 885 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 FAM133DP-201ENST00000464802 691 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 HMGB1P38-201ENST00000490557 577 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 NPM1P52-201ENST00000518264 846 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 AC019159.1-201ENST00000605094 187 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 AL161637.1-201ENST00000622380 412 ntBASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TCRBV3S1A0A5B6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 SNORA71.3-201ENST00000362582 128 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-697P-201ENST00000363348 107 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC240504.1-201ENST00000395709 845 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 RPL23AP33-201ENST00000442301 452 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 NANOGNBP1-201ENST00000448444 480 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC234775.1-201ENST00000454247 670 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 S100A11P2-201ENST00000467589 312 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 DSTNP2-201ENST00000504533 515 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 RN7SKP132-201ENST00000516001 208 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC084373.1-201ENST00000603311 235 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AL121917.1-203ENST00000605534 577 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC007619.2-201ENST00000605743 379 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC140725.3-201ENST00000616193 880 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC002064.3-201ENST00000623448 346 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 AC104446.1-201ENST00000613728 1321 ntBASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TCRBV3S1A0A5B6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-335P-201ENST00000364563 113 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC233728.2-201ENST00000425348 757 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC244033.1-201ENST00000426826 870 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 MTATP6P11-201ENST00000428071 670 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 SUMO1P4-201ENST00000429430 302 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 YME1L1P1-201ENST00000429435 297 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 ELOCP11-201ENST00000436690 332 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 SDR42E1P3-201ENST00000438345 502 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 ELOCP16-201ENST00000444494 332 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 FTH1P2-201ENST00000466086 412 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC113192.3-201ENST00000529152 742 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 DNAJC8P1-201ENST00000554535 372 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC022884.3-201ENST00000579571 248 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC245389.1-201ENST00000605141 529 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AC084757.4-201ENST00000616350 526 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 AP003122.6-201ENST00000623831 495 ntBASIC2.12□□□□□ -2.07
TCRBV3S1A0A5B6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 MIR34A-201ENST00000385130 110 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 TOMM22P1-201ENST00000418578 312 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 COTL1P1-201ENST00000422309 375 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 ARL4AP4-201ENST00000434170 518 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 ATP1B3P1-201ENST00000605365 821 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC245100.7-201ENST00000609678 442 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms