Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC103975.1-201ENST00000482506 483 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.3□□□□□ -2.04
TTC28Q96AY4 AC022709.1-201ENST00000615967 87 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TTC28Q96AY4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TTC28Q96AY4 AL355578.1-201ENST00000607405 1328 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TTC28Q96AY4 RNU2-2P-201ENST00000410396 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 AL591704.1-201ENST00000432574 275 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 MIR5092-201ENST00000583139 88 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC103710.1-201ENST00000610003 901 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.15-201ENST00000611544 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.16-201ENST00000613119 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.12-201ENST00000613778 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.9-201ENST00000615427 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.11-201ENST00000616345 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.2-201ENST00000616535 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.3-201ENST00000617785 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.19-201ENST00000618602 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 RNU2-1-201ENST00000618664 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.6-201ENST00000619225 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.5-201ENST00000619465 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 U2.10-201ENST00000620268 191 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC011978.2-201ENST00000569835 2054 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 SNORA67.5-201ENST00000391036 107 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AL160275.2-201ENST00000412010 394 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 MTCO2P17-201ENST00000424336 677 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 HSPE1P16-201ENST00000426640 348 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 FO393414.1-201ENST00000428697 1184 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC090543.1-201ENST00000492168 485 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 FTH1P11-201ENST00000517577 551 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
TTC28Q96AY4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TTC28Q96AY4 AC093536.2-201ENST00000565257 1406 ntBASIC2.29□□□□□ -2.04
TTC28Q96AY4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TTC28Q96AY4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TTC28Q96AY4 FRG1BP-201ENST00000278882 761 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 RNU1-57P-201ENST00000384491 166 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.28□□□□□ -2.04
TTC28Q96AY4 MIR4255-201ENST00000579351 72 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 AC108479.2-201ENST00000617314 601 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 MIR6515-201ENST00000619843 57 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TTC28Q96AY4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TTC28Q96AY4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.28□□□□□ -2.04
TTC28Q96AY4 OR2X1P-201ENST00000421144 687 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.28□□□□□ -2.04
TTC28Q96AY4 RPL21P41-201ENST00000459863 264 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TTC28Q96AY4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.28□□□□□ -2.04
TTC28Q96AY4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 HMGB1P50-201ENST00000605814 607 ntBASIC2.28□□□□□ -2.04
TTC28Q96AY4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
TTC28Q96AY4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
TTC28Q96AY4 AC017078.1-201ENST00000416146 368 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 HMGB1P19-201ENST00000517578 577 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 MIR4303-201ENST00000581299 66 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 AC010872.1-201ENST00000624225 675 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TTC28Q96AY4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
TTC28Q96AY4 OR4K11P-201ENST00000431829 904 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.27□□□□□ -2.05
TTC28Q96AY4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.27□□□□□ -2.05
TTC28Q96AY4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.27□□□□□ -2.05
TTC28Q96AY4 AC005730.3-201ENST00000583067 366 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.27□□□□□ -2.05
TTC28Q96AY4 RPAP2P1-201ENST00000603626 1168 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 RMST_8.1-201ENST00000610287 165 ntBASIC2.27□□□□□ -2.05
TTC28Q96AY4 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.27□□□□□ -2.05
TTC28Q96AY4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TTC28Q96AY4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TTC28Q96AY4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TTC28Q96AY4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TTC28Q96AY4 FAR1P1-201ENST00000427163 934 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 AL137159.1-201ENST00000452808 512 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 RNU1-123P-201ENST00000458950 160 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 SNORA64.4-201ENST00000516632 81 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TTC28Q96AY4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 SNORA51.11-201ENST00000384442 131 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 AL451074.5-201ENST00000415894 435 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.26□□□□□ -2.05
TTC28Q96AY4 AC098826.1-201ENST00000433943 471 ntBASIC2.26□□□□□ -2.05
TTC28Q96AY4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms