Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 AL163540.1-201ENST00000485382 386 ntBASIC2.16□□□□□ -2.06
RIF1Q5UIP0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RIF1Q5UIP0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
RIF1Q5UIP0 MIR423-201ENST00000362201 94 ntBASIC2.15□□□□□ -2.06
RIF1Q5UIP0 RNA5SP210-201ENST00000391034 120 ntBASIC2.15□□□□□ -2.06
RIF1Q5UIP0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.15□□□□□ -2.06
RIF1Q5UIP0 RN7SL75P-201ENST00000461926 281 ntBASIC2.15□□□□□ -2.06
RIF1Q5UIP0 AC126182.1-201ENST00000478134 357 ntBASIC2.15□□□□□ -2.06
RIF1Q5UIP0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.15□□□□□ -2.06
RIF1Q5UIP0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.15□□□□□ -2.06
RIF1Q5UIP0 RMST_9.1-201ENST00000619945 193 ntBASIC2.15□□□□□ -2.06
RIF1Q5UIP0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 PHKBP1-201ENST00000450951 1951 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 EXOC5P1-201ENST00000510543 1969 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 RNY1-201ENST00000364228 113 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 RN7SKP226-201ENST00000364912 300 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 NDUFB4P6-201ENST00000436819 366 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 AC092473.1-201ENST00000441098 221 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 XKRY-201ENST00000510392 1100 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
RIF1Q5UIP0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RIF1Q5UIP0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL162578.1-201ENST00000406202 378 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 RPS15AP12-201ENST00000419498 388 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AC117532.1-201ENST00000514638 323 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 SNORA9.3-201ENST00000516383 129 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AP001542.2-201ENST00000593141 364 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL049840.6-202ENST00000603373 279 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AC107021.2-201ENST00000567714 2095 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 OR11H5P-202ENST00000641612 1325 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 U8.10-201ENST00000384260 133 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 LAP3P1-201ENST00000403648 294 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AC019129.1-201ENST00000403786 261 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 VN1R17P-201ENST00000472048 1090 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL451049.1-201ENST00000608672 497 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 AL020991.1-201ENST00000612314 373 ntBASIC2.14□□□□□ -2.07
RIF1Q5UIP0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RIF1Q5UIP0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AL121834.1-202ENST00000404494 277 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 RPL30P2-201ENST00000414021 291 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 RPS12P5-201ENST00000423449 371 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 RPS24P8-201ENST00000431490 402 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AL451074.3-201ENST00000437709 472 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AP000936.3-201ENST00000438127 255 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 Z73417.1-201ENST00000447373 778 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 BX248123.2-201ENST00000606318 124 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AC005296.1-201ENST00000616145 209 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AC010872.1-201ENST00000624225 675 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AL445437.1-201ENST00000623157 3087 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 RNU2-2P-201ENST00000410396 191 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AC098826.1-201ENST00000433943 471 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AC017007.3-201ENST00000479865 435 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 AL390334.1-201ENST00000556395 450 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 U2.15-201ENST00000611544 191 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 U2.16-201ENST00000613119 191 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 U2.12-201ENST00000613778 191 ntBASIC2.13□□□□□ -2.07
RIF1Q5UIP0 U2.20-201ENST00000613956 192 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms