Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC007529.1-201ENST00000418574 2178 ntBASIC6.27□□□□□ -1.41
USP17L3A6NCW0 AC133552.1-201ENST00000569988 4007 ntBASIC6.27□□□□□ -1.41
USP17L3A6NCW0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
USP17L3A6NCW0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL442639.1-201ENST00000625030 1899 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC092681.1-201ENST00000297369 291 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 RN7SKP185-201ENST00000362813 326 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 Y_RNA.197-201ENST00000364004 102 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 RNU2-36P-201ENST00000410361 191 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 RN7SKP158-201ENST00000410453 326 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 RN7SKP17-201ENST00000411242 351 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL133482.1-201ENST00000415988 498 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL139396.1-201ENST00000421137 167 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 RPL23AP38-201ENST00000423801 469 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC112498.1-201ENST00000444401 332 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL031584.1-201ENST00000447169 754 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC004801.2-202ENST00000463559 283 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC006967.1-201ENST00000467608 589 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 RN7SL809P-201ENST00000482040 297 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 TRBVA-201ENST00000498804 316 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC006427.1-201ENST00000514359 712 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL137161.1-201ENST00000532231 390 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL139124.1-201ENST00000609123 421 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AC019193.3-201ENST00000609144 554 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL731566.2-201ENST00000618971 317 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 MIR7641-1-201ENST00000627518 61 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 BCORP1-203ENST00000513194 5093 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 BDP1P-201ENST00000582658 1990 ntBASIC6.26□□□□□ -1.41
USP17L3A6NCW0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP17L3A6NCW0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC009951.1-201ENST00000623674 2614 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 Y_RNA.187-201ENST00000363918 113 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 BX323014.1-201ENST00000412876 237 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC005517.2-201ENST00000424673 553 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 RPL35AP22-201ENST00000436855 335 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 SNORD97-201ENST00000459187 142 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 RN7SL459P-201ENST00000481078 302 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 RNU6-64P-201ENST00000517119 105 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 APOOP3-201ENST00000536787 586 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 SNRPGP18-201ENST00000553000 214 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC008745.1-201ENST00000604064 271 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AL031658.2-201ENST00000616850 651 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 AP000346.3-201ENST00000622821 210 ntBASIC6.25□□□□□ -1.41
USP17L3A6NCW0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USP17L3A6NCW0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms