Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AL049779.4-201ENST00000604500 156 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC211433.2-201ENST00000608433 387 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC104307.1-201ENST00000616142 196 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC006213.5-201ENST00000619673 288 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC073342.3-201ENST00000624211 193 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC233263.6-201ENST00000631132 1963 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AL049780.3-201ENST00000624612 1583 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 SNORD56.4-201ENST00000363883 71 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 SNORA70C-201ENST00000384538 135 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 RNA5SP252-201ENST00000391131 119 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 RPL7P25-201ENST00000404151 721 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC012497.1-201ENST00000429392 575 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 RN7SL132P-201ENST00000478131 296 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 RPS29P2-201ENST00000479278 136 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 VPS26AP1-201ENST00000483197 979 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 RPL7P38-201ENST00000488396 739 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 MLLT10P2-201ENST00000506434 249 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 PRELID3BP4-201ENST00000515476 571 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 IGKV2-26-201ENST00000518305 343 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC104229.1-201ENST00000561364 255 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC034105.3-201ENST00000565294 442 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 FAM60BP-201ENST00000578364 658 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 MIR4276-201ENST00000584832 70 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC106791.2-201ENST00000604680 391 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC124312.4-201ENST00000605533 310 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC005972.3-201ENST00000606304 481 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC069200.1-201ENST00000609511 323 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC104237.2-201ENST00000612456 443 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AL353748.2-201ENST00000622148 471 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AP000346.3-201ENST00000622821 210 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 FO624990.1-201ENST00000636373 85 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 AC011460.1-201ENST00000636268 1834 ntBASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VCX3AQ9NNX9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 SPRR2C-201ENST00000290702 219 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 SNORD82-201ENST00000365530 70 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 OR51A3P-201ENST00000413596 924 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AL445183.3-201ENST00000414168 502 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AC073143.1-201ENST00000436316 395 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 RPL23AP58-201ENST00000440453 469 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 MTND2P19-201ENST00000449129 1012 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 RPS20P24-201ENST00000457473 361 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AL031183.1-201ENST00000457667 207 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 RPL35AP28-201ENST00000459730 331 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AC073901.1-201ENST00000462471 408 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 KC877373.1-201ENST00000479066 408 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 NDUFA5P12-201ENST00000503796 343 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 SNORA9.3-201ENST00000516383 129 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 OR4P1P-201ENST00000530808 1136 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 LSM6P2-201ENST00000552208 177 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3AQ9NNX9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3AQ9NNX9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3AQ9NNX9 AC012618.3-205ENST00000637896 1496 ntBASIC2.74□□□□□ -1.97
VCX3AQ9NNX9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms