Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC010300.1-201ENST00000600671 5134 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 RNA5SP515-201ENST00000364570 118 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 MIR513A2-201ENST00000385249 127 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 RAC1P3-201ENST00000416129 580 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 MTCO1P21-201ENST00000416634 589 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 RPL17P36-201ENST00000420302 549 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 CYCSP46-201ENST00000423569 204 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC093698.1-201ENST00000423843 571 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC116337.2-201ENST00000477662 156 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 RPL23AP55-201ENST00000498163 452 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 TMEM251P1-201ENST00000503717 318 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC114981.1-201ENST00000503897 678 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 MTCYBP43-201ENST00000513621 740 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 MTCO1P35-201ENST00000515270 228 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 SNORA70.14-201ENST00000516205 110 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC104986.1-201ENST00000517978 436 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 PSMB7P1-201ENST00000556349 514 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC078795.2-201ENST00000602835 1252 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC004492.1-201ENST00000607036 742 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC011816.2-201ENST00000607089 556 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AL445567.2-201ENST00000618935 498 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC006927.3-201ENST00000638789 384 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AF127577.6-201ENST00000623352 2191 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 AC097504.1-201ENST00000515103 2415 ntBASIC4.85□□□□□ -1.63
LONRF3Q496Y0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.85□□□□□ -1.63
LONRF3Q496Y0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 Y_RNA.126-201ENST00000363382 111 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 RNA5SP175-201ENST00000364275 119 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 RNA5SP88-201ENST00000365560 109 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AL583834.1-201ENST00000406943 343 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 Y_RNA.619-201ENST00000410951 90 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 RPL23AP26-201ENST00000412728 464 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 CRYBB2P1-203ENST00000415709 538 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 RPL21P66-201ENST00000426566 466 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC006548.1-201ENST00000427470 102 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 LARP1BP3-201ENST00000437229 869 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC005297.2-201ENST00000450430 606 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 RPL26P28-201ENST00000451325 435 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 ANP32BP2-201ENST00000454525 545 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC106872.2-201ENST00000494303 480 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 CBX3P3-201ENST00000508108 532 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 IFITM8P-201ENST00000522529 394 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC239860.2-201ENST00000525886 270 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC109635.4-202ENST00000531666 412 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC006064.5-201ENST00000541782 248 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC069240.1-201ENST00000548774 375 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AL596327.1-201ENST00000603629 213 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC067959.1-201ENST00000604334 379 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC239868.4-201ENST00000608318 671 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 CR381572.1-201ENST00000625098 102 ntBASIC4.84□□□□□ -1.63
LONRF3Q496Y0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.84□□□□□ -1.63
LONRF3Q496Y0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.84□□□□□ -1.64
LONRF3Q496Y0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.84□□□□□ -1.64
LONRF3Q496Y0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.84□□□□□ -1.64
LONRF3Q496Y0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms