Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.09□□□□□ -1.75
NR1H2P55055 MTCO1P27-201ENST00000448269 226 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.09□□□□□ -1.75
NR1H2P55055 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.09□□□□□ -1.75
NR1H2P55055 AC092754.2-201ENST00000463506 460 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 VN1R17P-201ENST00000472048 1090 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC092451.1-201ENST00000480211 153 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AL024509.2-201ENST00000493462 493 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.09□□□□□ -1.75
NR1H2P55055 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1H2P55055 AC020593.1-201ENST00000507399 299 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.09□□□□□ -1.75
NR1H2P55055 AC004062.1-201ENST00000509926 645 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.09□□□□□ -1.75
NR1H2P55055 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.09□□□□□ -1.75
NR1H2P55055 AC087481.2-201ENST00000565492 330 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC011260.1-201ENST00000578420 472 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1H2P55055 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.09□□□□□ -1.75
NR1H2P55055 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1H2P55055 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1H2P55055 WISP1-OT1-201ENST00000602893 642 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC020910.2-201ENST00000603635 610 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AL356218.2-201ENST00000605264 187 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 Z98200.1-201ENST00000607298 470 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC009090.3-201ENST00000616553 565 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AP005019.3-201ENST00000620418 560 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AL360181.4-201ENST00000621752 134 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC073530.2-201ENST00000623987 261 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC092192.1-201ENST00000633154 1018 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC099063.3-201ENST00000642066 185 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.76
NR1H2P55055 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NR1H2P55055 AC139769.1-204ENST00000472297 1931 ntBASIC4.09□□□□□ -1.76
NR1H2P55055 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.09□□□□□ -1.76
NR1H2P55055 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
NR1H2P55055 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H2P55055 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 RNU6-500P-201ENST00000362349 107 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 RNU6-97P-201ENST00000363387 104 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 Y_RNA.234-201ENST00000364409 97 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 Y_RNA.302-201ENST00000364997 102 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H2P55055 HSPE1P26-201ENST00000405341 275 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 MIR1305-201ENST00000408300 86 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H2P55055 RAD23BP1-201ENST00000421404 1227 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 RPEP3-201ENST00000425462 676 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 DUTP6-201ENST00000425573 462 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.08□□□□□ -1.76
NR1H2P55055 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H2P55055 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC079168.2-201ENST00000453977 416 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC017015.1-201ENST00000477387 286 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC069499.1-201ENST00000489433 509 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AP001025.2-201ENST00000490908 477 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC034222.1-201ENST00000494052 532 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC022447.3-201ENST00000506865 495 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.08□□□□□ -1.76
NR1H2P55055 POU5F1P7-201ENST00000508759 541 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC021146.1-201ENST00000511202 716 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC093840.1-201ENST00000511599 336 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC117532.1-201ENST00000514638 323 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 RN7SKP122-201ENST00000515923 296 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 IGHV3-32-201ENST00000519182 355 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H2P55055 SETP2-201ENST00000553886 926 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC136624.4-201ENST00000573044 370 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AP005136.1-201ENST00000579765 429 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC023575.1-201ENST00000580510 358 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.08□□□□□ -1.76
NR1H2P55055 AC015726.1-201ENST00000602353 681 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 BPIFA4P-203ENST00000603168 689 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AL590229.1-201ENST00000603497 542 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AL133338.2-201ENST00000604292 736 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC115286.1-201ENST00000604298 434 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AL160290.3-201ENST00000604869 165 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AL451086.1-201ENST00000605596 223 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC108467.2-201ENST00000617640 1597 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC008443.7-201ENST00000622195 246 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 CR381670.1-201ENST00000624291 1693 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 AC068724.3-201ENST00000625906 87 ntBASIC4.08□□□□□ -1.76
NR1H2P55055 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
NR1H2P55055 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1H2P55055 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H2P55055 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms