Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 PSMA2P3-201ENST00000429685 675 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC010881.1-201ENST00000433830 235 ntBASIC4.36□□□□□ -1.71
CIITAP33076 ATP5HP2-201ENST00000433885 485 ntBASIC4.36□□□□□ -1.71
CIITAP33076 MTCYBP39-201ENST00000437562 491 ntBASIC4.36□□□□□ -1.71
CIITAP33076 MTND1P34-201ENST00000438556 671 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL359073.1-201ENST00000448036 403 ntBASIC4.36□□□□□ -1.71
CIITAP33076 RPL29P29-201ENST00000448725 423 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 AL451050.1-201ENST00000450126 415 ntBASIC4.36□□□□□ -1.71
CIITAP33076 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 SLC31A1P1-201ENST00000451221 567 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL645939.1-201ENST00000453429 797 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
CIITAP33076 AC012170.1-201ENST00000495139 359 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC004069.2-201ENST00000505438 1114 ntBASIC4.36□□□□□ -1.71
CIITAP33076 Y_RNA.695-201ENST00000516715 107 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.36□□□□□ -1.71
CIITAP33076 AC090281.1-201ENST00000523019 276 ntBASIC4.36□□□□□ -1.71
CIITAP33076 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.36□□□□□ -1.71
CIITAP33076 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 SLC2A13P1-201ENST00000531560 322 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.36□□□□□ -1.71
CIITAP33076 AC022880.1-201ENST00000534017 973 ntBASIC4.36□□□□□ -1.71
CIITAP33076 OR6C7P-201ENST00000547875 934 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.36□□□□□ -1.71
CIITAP33076 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.36□□□□□ -1.71
CIITAP33076 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CIITAP33076 AC090877.1-201ENST00000561418 344 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC087499.8-201ENST00000578406 226 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC006130.2-201ENST00000586202 326 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC008507.1-201ENST00000587506 734 ntBASIC4.36□□□□□ -1.71
CIITAP33076 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 AC004492.1-201ENST00000607036 742 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL391497.1-201ENST00000608671 547 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC106028.5-201ENST00000610332 395 ntBASIC4.36□□□□□ -1.71
CIITAP33076 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 AL591424.2-201ENST00000617023 128 ntBASIC4.36□□□□□ -1.71
CIITAP33076 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 RMST_9.1-201ENST00000619945 193 ntBASIC4.36□□□□□ -1.71
CIITAP33076 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 AC092656.1-203ENST00000624134 423 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL356121.2-201ENST00000624715 780 ntBASIC4.36□□□□□ -1.71
CIITAP33076 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CIITAP33076 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 AL122126.1-201ENST00000546905 1318 ntBASIC4.36□□□□□ -1.71
CIITAP33076 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CIITAP33076 RNU6-433P-201ENST00000363216 104 ntBASIC4.35□□□□□ -1.71
CIITAP33076 RN7SKP44-201ENST00000363602 316 ntBASIC4.35□□□□□ -1.71
CIITAP33076 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 MTCO3P31-201ENST00000405526 789 ntBASIC4.35□□□□□ -1.71
CIITAP33076 MIR1250-201ENST00000408098 113 ntBASIC4.35□□□□□ -1.71
CIITAP33076 JKAMPP1-201ENST00000413804 919 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.35□□□□□ -1.71
CIITAP33076 RPS12P23-201ENST00000419579 400 ntBASIC4.35□□□□□ -1.71
CIITAP33076 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 MTCO3P1-205ENST00000422088 832 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CIITAP33076 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 AC241584.1-201ENST00000438469 1241 ntBASIC4.35□□□□□ -1.71
CIITAP33076 MTND2P20-201ENST00000440805 661 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 ZNF114P1-201ENST00000453500 292 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 AC072039.1-201ENST00000477611 581 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC146944.2-203ENST00000502493 354 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 AC091965.2-201ENST00000512324 613 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC026726.1-201ENST00000512859 601 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC139495.1-202ENST00000513164 354 ntBASIC4.35□□□□□ -1.71
CIITAP33076 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CIITAP33076 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.35□□□□□ -1.71
CIITAP33076 OR8L1P-201ENST00000534005 955 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 AL512347.1-201ENST00000566420 503 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.35□□□□□ -1.71
CIITAP33076 AC107982.3-201ENST00000584957 985 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.35□□□□□ -1.71
CIITAP33076 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.35□□□□□ -1.71
CIITAP33076 AL020997.2-201ENST00000602607 184 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AL031775.1-201ENST00000607014 887 ntBASIC4.35□□□□□ -1.71
CIITAP33076 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CIITAP33076 MIR7844-201ENST00000616161 122 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC004825.2-201ENST00000616634 455 ntBASIC4.35□□□□□ -1.71
CIITAP33076 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.35□□□□□ -1.71
CIITAP33076 AC018816.2-201ENST00000621460 353 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC009878.1-201ENST00000621819 340 ntBASIC4.35□□□□□ -1.71
CIITAP33076 AC008443.7-201ENST00000622195 246 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms