Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-777P-201ENST00000364265 104 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AC068538.1-201ENST00000376856 336 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 U8.14-201ENST00000390843 143 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 RN7SKP33-201ENST00000410942 340 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 BTF3L4P1-201ENST00000413813 468 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 CYCSP46-201ENST00000423569 204 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.79□□□□□ -1.64
PRPF3O43395 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 AL353691.1-201ENST00000451332 387 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 AC098824.1-201ENST00000453565 980 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 HMGB1P25-201ENST00000468402 607 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 AP000797.1-201ENST00000478870 387 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AC006517.1-201ENST00000480485 328 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PRPF3O43395 AC017037.1-201ENST00000508460 471 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 MTCO3P7-201ENST00000510008 774 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 RN7SKP122-201ENST00000515923 296 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 RNU6-714P-201ENST00000516963 103 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 IFITM8P-201ENST00000522529 394 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 OR4P1P-201ENST00000530808 1136 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF3O43395 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 AC025884.1-201ENST00000556034 378 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF3O43395 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 AC025594.3-201ENST00000613068 790 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 MIR6716-201ENST00000613413 80 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AC083809.1-201ENST00000615051 472 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 MIR7151-201ENST00000617477 60 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 AL161637.1-201ENST00000622380 412 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AL356585.4-201ENST00000623078 1229 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AL356121.2-201ENST00000624715 780 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF3O43395 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PRPF3O43395 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 PABPC1P9-201ENST00000426076 1612 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRPF3O43395 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF3O43395 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 AC010300.1-201ENST00000600671 5134 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 FRG1BP-201ENST00000278882 761 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRPF3O43395 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 RPL32P3-201ENST00000359025 275 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 RNA5SP52-201ENST00000362448 134 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 RNA5SP388-201ENST00000362584 119 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 Y_RNA.51-201ENST00000362725 102 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 RNU6-623P-201ENST00000363143 105 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 RNU6-343P-201ENST00000364709 104 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 SNORA62-201ENST00000365493 153 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 RPS7P15-201ENST00000415804 584 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 OR1AA1P-201ENST00000419597 916 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AL391219.1-201ENST00000422570 483 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 OR8F1P-201ENST00000425243 930 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.78□□□□□ -1.64
PRPF3O43395 TRIM60P18-201ENST00000441518 828 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF3O43395 SNORD121B-201ENST00000458838 81 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRPF3O43395 RN7SL385P-201ENST00000468873 276 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 AC021382.1-201ENST00000483523 359 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC093278.1-201ENST00000494700 600 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC025445.1-201ENST00000502728 300 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF3O43395 MTND4P2-201ENST00000507767 1203 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF3O43395 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 IGHV3-32-201ENST00000519182 355 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 OR5M7P-201ENST00000526140 972 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 AC018630.1-201ENST00000541376 925 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC023161.2-201ENST00000551218 780 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC007599.1-201ENST00000568688 1174 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF3O43395 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 AP001981.2-201ENST00000603241 418 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC011451.2-201ENST00000604303 598 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AL359999.1-201ENST00000604513 294 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 AC128687.1-201ENST00000605304 619 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC108479.2-201ENST00000617314 601 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 AC092140.2-201ENST00000618027 521 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms