Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SNORA51.6-201ENST00000384151 125 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC091390.3-201ENST00000426478 338 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 RAC1P8-201ENST00000427086 527 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 VDAC1P3-201ENST00000434069 851 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 MRPS18BP2-201ENST00000434310 759 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 RPS20P24-201ENST00000457473 361 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 VPS26AP1-201ENST00000483197 979 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AL358832.1-201ENST00000497800 389 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 SNORA19.3-201ENST00000516165 130 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 SNORA31.20-201ENST00000517111 133 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 RN7SKP289-201ENST00000517244 295 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 OR7E13P-201ENST00000526052 910 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AP001189.2-201ENST00000527320 189 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 DEFB130C-202ENST00000530001 230 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC109635.4-202ENST00000531666 412 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 AL389895.1-201ENST00000554127 252 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC012531.5-201ENST00000611375 151 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC008083.4-201ENST00000615076 444 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC018755.4-201ENST00000619715 454 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 AC040168.1-201ENST00000623594 991 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 AL392088.2-201ENST00000637607 285 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF6Q9Y252 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF6Q9Y252 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF6Q9Y252 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF6Q9Y252 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 RNU6-730P-201ENST00000383954 104 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 RNU6-1257P-201ENST00000384625 110 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 RNU6-821P-201ENST00000390995 107 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC016769.3-201ENST00000396562 315 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 RPL31P1-201ENST00000398116 372 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AL079342.2-201ENST00000403367 482 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 RPL23AP47-201ENST00000408017 460 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC073063.1-201ENST00000434352 607 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC073387.1-201ENST00000453261 709 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 RN7SL330P-201ENST00000469709 307 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC079203.1-201ENST00000487972 404 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 OR4G11P-201ENST00000492842 939 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 TRAV31-201ENST00000502780 342 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC093752.1-206ENST00000511823 336 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 RNU6-276P-201ENST00000516114 96 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 OR4P1P-201ENST00000530808 1136 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC037471.2-201ENST00000564941 598 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 MIR5195-201ENST00000583555 115 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC096947.1-201ENST00000603233 470 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC112220.2-201ENST00000605513 533 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AL442067.2-201ENST00000614033 363 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AL157770.1-201ENST00000623049 439 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 AP003485.1-201ENST00000625093 753 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 MFSD8-245ENST00000641743 948 ntBASIC3.3□□□□□ -1.88
RNF6Q9Y252 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF6Q9Y252 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RNF6Q9Y252 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
RNF6Q9Y252 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF6Q9Y252 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF6Q9Y252 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF6Q9Y252 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF6Q9Y252 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RNF6Q9Y252 SKINT1L-201ENST00000401057 817 ntBASIC3.29□□□□□ -1.88
RNF6Q9Y252 AL024474.1-201ENST00000404655 591 ntBASIC3.29□□□□□ -1.88
RNF6Q9Y252 RNA5SP31-201ENST00000411144 127 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms