Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC098826.2-201ENST00000452011 651 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 NUTF2P7-201ENST00000453086 375 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL136097.1-201ENST00000456945 913 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL139824.2-201ENST00000458731 1095 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC026410.2-201ENST00000460281 156 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC092754.2-201ENST00000463506 460 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 RN7SL330P-201ENST00000469709 307 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC114981.1-201ENST00000503897 678 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC098862.1-201ENST00000504991 413 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MLLT10P2-201ENST00000506434 249 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 RNY4P37-201ENST00000516225 96 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC105185.1-201ENST00000518705 535 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL163153.1-201ENST00000554223 283 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL391156.1-201ENST00000554965 554 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC004987.4-201ENST00000603383 338 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC012603.1-201ENST00000606424 528 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC245297.2-201ENST00000610119 565 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MIR6868-201ENST00000611215 58 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MIR6798-201ENST00000612887 67 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL355493.4-201ENST00000618530 292 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AP002791.1-201ENST00000623291 381 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL079343.1-201ENST00000572358 1771 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC016588.2-201ENST00000632484 3021 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 CYCSP45-201ENST00000402289 315 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AL138878.1-201ENST00000405131 347 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RPL21P65-201ENST00000406094 466 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AL591034.1-201ENST00000407447 340 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 MIR1284-201ENST00000408337 120 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 NEK4P1-201ENST00000433383 879 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RPS25P9-201ENST00000435591 252 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RPL23AP74-201ENST00000437246 471 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 USP9YP34-201ENST00000453983 808 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RPS23P3-201ENST00000470993 430 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC110792.1-201ENST00000491826 472 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 MTCYBP17-201ENST00000503579 789 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC026412.2-201ENST00000512270 1075 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 SNORA3.4-201ENST00000515969 96 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RN7SKP21-201ENST00000516503 220 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC104986.1-201ENST00000517978 436 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RPL12P22-201ENST00000519073 490 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC126177.3-201ENST00000551839 688 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 RPL23AP92-201ENST00000603609 255 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC124312.4-201ENST00000605533 310 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC006270.3-201ENST00000605967 1036 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AC009464.1-201ENST00000615731 469 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 AL731566.2-201ENST00000618971 317 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 SGO1P2-201ENST00000429458 1589 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
NUP54Q7Z3B4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms