Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 GNG5P1-201ENST00000255500 204 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 RNA5SP391-201ENST00000363456 119 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 RNU6-317P-201ENST00000384031 107 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 SNORA11-201ENST00000408789 128 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC080125.1-201ENST00000414888 684 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 RPS24P8-201ENST00000431490 402 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AL513343.1-201ENST00000451818 792 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC133134.1-201ENST00000466800 359 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 RN7SKP132-201ENST00000516001 208 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 RNU1-61P-201ENST00000516107 151 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 SNORD116-30-201ENST00000516468 85 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 RNU6-1073P-201ENST00000517182 106 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC090136.1-201ENST00000520009 240 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 SNORD84-203ENST00000584275 78 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AL392112.1-201ENST00000605115 829 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AP000526.1-201ENST00000603308 1388 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 MAPK10-266ENST00000641066 6555 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AP001350.1-201ENST00000601906 1524 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 CUL1P1-201ENST00000509510 2425 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RNU6-618P-201ENST00000363518 112 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 SNORA25.6-201ENST00000364121 118 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 MIR142-201ENST00000384835 87 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 SNORA48.2-201ENST00000390926 124 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPL21P75-201ENST00000396599 483 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL360182.1-201ENST00000397433 468 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPS3AP26-201ENST00000398259 784 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPL21P28-201ENST00000401418 483 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL592114.1-201ENST00000403842 483 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL162578.1-201ENST00000406202 378 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RNA5SP498-201ENST00000411342 120 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 SSXP9-201ENST00000417503 292 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC008280.1-201ENST00000418851 412 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 OR6K1P-201ENST00000456766 971 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPL21P39-201ENST00000463605 483 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC011979.1-201ENST00000472300 483 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPL21P93-201ENST00000480465 489 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC233702.1-201ENST00000482905 502 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC087190.1-201ENST00000484462 480 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC093591.1-201ENST00000491435 481 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPL21P16-201ENST00000495531 483 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 RPS27P27-201ENST00000498779 255 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC034159.1-201ENST00000513885 583 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC104986.1-201ENST00000517978 436 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 COX6CP8-201ENST00000522620 226 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC243972.3-201ENST00000539655 198 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 GTF2IP8-201ENST00000560687 584 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 PCNAP1-202ENST00000595299 752 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AP000787.2-201ENST00000604432 568 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC073387.2-201ENST00000604797 784 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 MIR7973-1-201ENST00000614683 76 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC091046.2-201ENST00000620775 665 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AL136520.1-201ENST00000600311 1322 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 ZNF833P-201ENST00000424938 1494 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 AC006378.2-201ENST00000623178 2476 ntBASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV27A0A087WT01 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV27A0A087WT01 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV27A0A087WT01 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV27A0A087WT01 DEFB109C-201ENST00000382575 264 ntBASIC2.29□□□□□ -2.04
TRAV27A0A087WT01 DEFB109B-201ENST00000382656 264 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms