Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL035551.1-201ENST00000446931 348 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.9□□□□□ -2.11
VPS13CQ709C8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 SNORD114-26-201ENST00000363543 72 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 AL590084.1-201ENST00000407885 387 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 RNU6-1140P-201ENST00000410517 106 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AL451074.5-201ENST00000415894 435 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 RPL23AP42-201ENST00000471152 471 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AP000893.1-201ENST00000474462 794 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC117529.2-201ENST00000512159 2068 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 MIR449C-201ENST00000516047 92 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 RNA5SP200-201ENST00000516360 103 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC025881.1-201ENST00000518851 512 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 YWHAEP7-203ENST00000622054 312 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC026523.2-201ENST00000625039 7739 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC011460.1-201ENST00000636268 1834 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13CQ709C8 MIR337-201ENST00000362281 93 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 MIR181B1-201ENST00000385240 110 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC080125.1-201ENST00000414888 684 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 RPL23AP74-201ENST00000437246 471 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC128657.1-201ENST00000549459 145 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 MTCYBP28-201ENST00000566728 1132 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13CQ709C8 MIR21-201ENST00000362134 72 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AL512633.1-201ENST00000399931 655 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 RPL23AP16-201ENST00000441715 421 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC147055.1-201ENST00000509261 750 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 MIR3199-1-201ENST00000582434 88 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC083760.1-201ENST00000589621 670 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 AC002064.3-201ENST00000623448 346 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13CQ709C8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
VPS13CQ709C8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13CQ709C8 MTND4P10-201ENST00000446199 1363 ntBASIC1.89□□□□□ -2.11
VPS13CQ709C8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 SPA17P1-201ENST00000416656 452 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC021269.2-201ENST00000532318 330 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 NDUFA5P6-201ENST00000542110 379 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 MIR5002-201ENST00000584713 97 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC006272.2-201ENST00000594725 163 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC007342.7-201ENST00000624610 2337 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC025125.1-201ENST00000624743 1922 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13CQ709C8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 LAP3P1-201ENST00000403648 294 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AL355379.1-201ENST00000405542 640 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 RPS6P2-201ENST00000454208 705 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13CQ709C8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13CQ709C8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VPS13CQ709C8 MIR613-201ENST00000385248 95 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC004866.2-201ENST00000438285 481 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC104389.3-201ENST00000445629 235 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC117522.2-201ENST00000510049 657 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC008083.2-201ENST00000546707 476 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 AC011492.1-201ENST00000600023 315 ntBASIC1.88□□□□□ -2.11
VPS13CQ709C8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS13CQ709C8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13CQ709C8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 AL020991.1-201ENST00000612314 373 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 AC090229.1-201ENST00000590983 1609 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13CQ709C8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13CQ709C8 AC009487.4-201ENST00000624969 3585 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 RNU1-100P-201ENST00000365255 165 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13CQ709C8 RNU6-1231P-201ENST00000517185 103 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms