Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC013828.1-201ENST00000481845 158 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC093752.1-206ENST00000511823 336 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC027309.2-201ENST00000520566 192 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC093331.1-201ENST00000521474 169 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC104027.1-201ENST00000521887 300 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC006518.1-201ENST00000541449 943 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AL606834.3-201ENST00000602615 496 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC018645.2-201ENST00000609151 472 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC010975.3-201ENST00000618727 978 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC040168.1-201ENST00000623594 991 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AL138960.2-201ENST00000625145 535 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 NUP58P1-201ENST00000502546 1738 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 SNORA73.2-201ENST00000364946 201 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 SNORD3H-201ENST00000384486 214 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 U3.29-201ENST00000391296 212 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC007066.1-201ENST00000392902 381 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC016769.3-201ENST00000396562 315 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC126124.2-201ENST00000413542 321 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 Z99755.1-201ENST00000414048 380 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 USP9YP31-201ENST00000431405 881 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 RPS20P24-201ENST00000457473 361 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 RPL23AP67-201ENST00000465341 474 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC078785.3-201ENST00000476607 425 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 UBE2CP3-201ENST00000502715 450 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC021146.5-201ENST00000503544 545 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 SNORA64.4-201ENST00000516632 81 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC008127.2-201ENST00000549925 1075 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC093227.2-201ENST00000589357 285 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AL020997.2-201ENST00000602607 184 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AC128687.1-201ENST00000605304 619 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX47Q9H0S4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.57□□□□□ -1.84
DDX47Q9H0S4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 Z99496.1-201ENST00000469424 1477 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 U8.11-201ENST00000384699 133 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 U8.12-201ENST00000384701 133 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AL355143.1-201ENST00000407101 841 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 SEPT7P5-201ENST00000434048 306 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 RPL23AP22-201ENST00000437556 453 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AL662791.1-201ENST00000441992 928 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC008264.1-201ENST00000447612 367 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC112492.1-201ENST00000449607 712 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 HMGN2P16-201ENST00000456802 261 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 U8.18-201ENST00000459285 133 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AL672167.3-201ENST00000465951 960 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 RPS4XP13-201ENST00000483219 789 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms