Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL162713.1-201ENST00000604480 262 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 AL035413.2-201ENST00000604801 525 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 AL445567.2-201ENST00000618935 498 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 FP236240.3-201ENST00000623061 327 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 AC012640.5-201ENST00000623897 319 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 AP000553.5-201ENST00000641933 54 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 SGO1P2-201ENST00000429458 1589 ntBASIC1.37□□□□□ -2.19
LINC01558Q9Y6Z2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RNU1-32P-201ENST00000363937 159 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 SNORA9.2-201ENST00000365361 133 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 MIR105-2-201ENST00000385083 81 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AP002784.2-201ENST00000397300 549 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AL353692.2-201ENST00000407054 335 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RNA5SP120-201ENST00000410900 112 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RN7SKP273-201ENST00000411392 314 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RPL7P8-201ENST00000411964 730 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AP000534.2-201ENST00000412729 568 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC006455.6-201ENST00000426192 893 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 YY1P1-201ENST00000427625 668 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC104389.3-201ENST00000445629 235 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AL359073.1-201ENST00000448036 403 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 SNRPGP6-201ENST00000451124 220 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 HMGB1P26-201ENST00000452520 628 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 snoU13.22-201ENST00000459428 104 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RPL35AP28-201ENST00000459730 331 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RN7SL354P-201ENST00000469282 294 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RPL27AP5-201ENST00000469428 449 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RN7SL303P-201ENST00000469773 251 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC008413.1-201ENST00000511864 177 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 TTC39CP1-201ENST00000512513 755 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 ACTR6P1-201ENST00000514311 1104 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RNU6-1004P-201ENST00000516584 111 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AP000867.2-201ENST00000532468 320 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 TRAV28-201ENST00000557548 323 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC087499.8-201ENST00000578406 226 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 RN7SL703P-201ENST00000578485 302 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC020914.6-201ENST00000594327 272 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC010591.1-201ENST00000603941 649 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC008277.2-201ENST00000605196 797 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AL121917.1-203ENST00000605534 577 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 BNIP3P7-201ENST00000605641 516 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC092650.2-201ENST00000619984 902 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 KDM5DP1-201ENST00000622542 298 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 AC109315.1-201ENST00000584143 1347 ntBASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
LINC01558Q9Y6Z2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AL359893.1-201ENST00000447628 1580 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 SNORD67-201ENST00000390833 111 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 PPIAP31-201ENST00000405422 495 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 RN7SKP27-201ENST00000410684 333 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 RPL23AP27-201ENST00000415161 451 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 MTCO3P12-201ENST00000416718 547 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 MYL8P-204ENST00000431574 518 ntBASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01558Q9Y6Z2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms