Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RN7SL330P-201ENST00000469709 307 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC010618.1-201ENST00000469924 477 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC110792.1-201ENST00000491826 472 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC091167.1-201ENST00000492017 396 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC104090.1-201ENST00000506341 1171 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RN7SKP31-201ENST00000516354 278 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RNU6-579P-201ENST00000516879 102 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AP000619.3-201ENST00000535634 1127 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC007834.2-201ENST00000536310 343 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 SERPINE4P-201ENST00000554978 281 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC017100.2-201ENST00000584628 355 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC234771.5-201ENST00000600161 514 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 HSPE1P14-201ENST00000605812 302 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC092653.1-201ENST00000608509 531 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC121761.2-201ENST00000617300 689 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC073348.1-201ENST00000623002 331 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AL118496.1-201ENST00000440201 1812 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 SAGE2P-201ENST00000420011 2126 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 TAF9BP1-201ENST00000396646 746 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 RNA5SP293-201ENST00000410527 113 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 RNA5SP31-201ENST00000411144 127 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC017079.2-201ENST00000416102 485 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC092634.6-201ENST00000418558 192 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC009480.2-201ENST00000422916 432 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 RPL36P19-201ENST00000430744 301 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 MTND2P22-201ENST00000444325 1033 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 OR6K5P-201ENST00000447050 945 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC125238.1-201ENST00000448842 249 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 PNPLA4P1-201ENST00000458328 305 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 RPS3AP22-201ENST00000488297 769 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 FTH1P24-201ENST00000503502 462 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC010587.2-201ENST00000511727 448 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 RN7SKP96-201ENST00000516948 297 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 SNORA48.10-201ENST00000516965 160 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AP003461.1-201ENST00000528866 78 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 OSBPL9P5-201ENST00000542581 171 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC004024.1-201ENST00000549244 247 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC037471.2-201ENST00000564941 598 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC008507.1-201ENST00000587506 734 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AL031281.1-201ENST00000604049 488 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC079684.1-201ENST00000621405 437 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AL732618.1-201ENST00000623251 301 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 ZNF826P-207ENST00000622273 1910 ntBASIC3.52□□□□□ -1.85
NDE1Q9NXR1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDE1Q9NXR1 MTND5P31-201ENST00000419366 1374 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 OR5H2-201ENST00000355273 945 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RNU6-492P-201ENST00000363035 104 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RNU1-32P-201ENST00000363937 159 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RNU6-115P-201ENST00000364310 107 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RNU6-398P-201ENST00000384143 109 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 HNRNPDP2-201ENST00000406475 478 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 LUZP4P1-201ENST00000415420 344 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC068533.1-201ENST00000418542 415 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 USP9YP11-201ENST00000427537 717 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms