Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 AC084757.4-201ENST00000616350 526 ntBASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 SNHG22-203ENST00000617833 660 ntBASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.84□□□□□ -2.11
CDC42SE2Q9NRR3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
CDC42SE2Q9NRR3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 ZNF807-201ENST00000328088 1707 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 MIR34B-201ENST00000385076 84 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 FO393413.1-201ENST00000402892 195 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 BTBD10P2-201ENST00000404779 676 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL138880.1-201ENST00000405824 642 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 MIR1289-1-201ENST00000408836 144 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 EEF1A1P41-201ENST00000414667 207 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 RPS6P14-201ENST00000425165 719 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL512649.1-201ENST00000428997 581 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 YME1L1P1-201ENST00000429435 297 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 ELOCP11-201ENST00000436690 332 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 RPL23AP33-201ENST00000442301 452 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 ELOCP16-201ENST00000444494 332 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 VN1R34P-201ENST00000447387 883 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 MIR5092-201ENST00000583139 88 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 MIR4635-201ENST00000583759 79 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AP000787.2-201ENST00000604432 568 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AC113194.1-201ENST00000606037 500 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AL592494.3-201ENST00000609485 464 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 TAB3P1-202ENST00000452645 1634 ntBASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.83□□□□□ -2.12
CDC42SE2Q9NRR3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 SNORA25.6-201ENST00000364121 118 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 DEFA7P-201ENST00000382676 285 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 MIR142-201ENST00000384835 87 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 MIR320B1-201ENST00000390209 79 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 RNA5SP210-201ENST00000391034 120 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AL138827.1-201ENST00000402666 306 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 RPL35AP12-201ENST00000425362 338 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 FTH1P2-201ENST00000466086 412 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 RNU6-1073P-201ENST00000517182 106 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC010306.1-201ENST00000523223 1117 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC123904.3-201ENST00000547218 814 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AL121603.1-201ENST00000553815 142 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC007954.1-201ENST00000554198 494 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AL160237.3-201ENST00000604114 1013 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 HSPE1P14-201ENST00000605812 302 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AC007620.3-201ENST00000608131 497 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 AL121594.5-201ENST00000631724 573 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 MTND5P1-201ENST00000445440 1375 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.82□□□□□ -2.12
CDC42SE2Q9NRR3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 MIR6073-201ENST00000352083 89 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 NACA3P-201ENST00000359690 648 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 RNU6-335P-201ENST00000364563 113 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 DEFB109C-201ENST00000382575 264 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 DEFB109B-201ENST00000382656 264 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL591034.1-201ENST00000407447 340 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 RNA5SP21-201ENST00000410917 96 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 RPS3AP25-201ENST00000411660 793 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 MTCYBP7-201ENST00000419540 1134 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 YPEL5P1-201ENST00000419731 367 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL645937.1-202ENST00000421799 937 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 NIPA2P1-201ENST00000426223 976 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL139132.1-201ENST00000431587 344 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC011816.1-201ENST00000441346 546 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL445669.2-201ENST00000454425 421 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms