Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC021146.4-201ENST00000309229 279 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 RNA5SP305-201ENST00000362665 119 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 RNA5SP189-201ENST00000364920 115 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 RNA5SP235-201ENST00000365411 114 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 Y_RNA.560-201ENST00000384689 102 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 CYB5AP4-201ENST00000396692 399 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL356421.1-201ENST00000403255 413 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 RN7SKP229-201ENST00000410465 302 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL137014.1-201ENST00000420490 1226 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 MTCYBP45-201ENST00000435243 565 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 CEACAMP4-201ENST00000457676 421 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 GAPDHP56-201ENST00000506031 988 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC005178.1-201ENST00000508392 440 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC005921.1-201ENST00000510589 286 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC093677.1-201ENST00000514414 678 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 RNU6-759P-201ENST00000516740 103 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 OR5D15P-201ENST00000531671 942 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 MIR4330-201ENST00000579077 105 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 MIR5047-201ENST00000579212 100 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL353997.4-201ENST00000586196 166 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC087763.1-201ENST00000603391 286 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC008443.7-201ENST00000622195 246 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL356585.4-201ENST00000623078 1229 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC068057.2-201ENST00000624047 895 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AL445523.1-201ENST00000451184 1362 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H4Q96RI1 AC108467.2-201ENST00000617640 1597 ntBASIC3.97□□□□□ -1.77
NR1H4Q96RI1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NR1H4Q96RI1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RNU6-500P-201ENST00000362349 107 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RNU6-433P-201ENST00000363216 104 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RNU6-97P-201ENST00000363387 104 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RNA5SP507-201ENST00000363603 121 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RNU6-744P-201ENST00000365557 107 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 MIR323B-201ENST00000385269 82 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 MTCO1P17-201ENST00000411522 491 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC140479.3-201ENST00000418944 1126 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RPS27AP7-201ENST00000422792 455 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL359265.2-201ENST00000434367 631 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 LSM1P1-201ENST00000438629 273 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL500522.2-201ENST00000448562 343 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL353691.1-201ENST00000451332 387 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AURKAPS2-201ENST00000454983 333 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL049830.2-201ENST00000480072 201 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 RN7SL629P-201ENST00000489622 285 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC022447.3-201ENST00000506865 495 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC010486.3-201ENST00000511602 785 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC034159.1-201ENST00000513885 583 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 CR383656.7-201ENST00000548164 174 ntBASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H4Q96RI1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms